VarMod
Variant Modeller

Modelling functional effects of non-synonymous variants


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Submission

 

VarMod uses structural modelling of proteins, their ligand binding sites and protein-protein interface sites to analyse non-synonymous single nucleotide variants with the aim of identifying those that are likely to be functional and have a role in causing risk or altering disease risk.

Users submit a sequence and a list of variants.  See About for full details on how the method works.
Please use the form below to obtain function predictions for a sequence. See Help for details on the different options available.


Use this button to view sample input data

Paste your protein sequence here (FASTA format or raw sequence):

Uniprot id:   optional (used for interface analysis)

variants:
                    example format: A20R, P423E

email address:  optional

Submission description: optional

It may take a few seconds to respond after hitting submit, please do not press more than once

Retrieve Previous Results

Enter submission id to check VarMod results:
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Computational Biology Group, University of Kent, UK
Mark Wass